Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav4n-4A0A075B615 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Idnk-204ENSMUST00000226010 1898 ntBASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4n-4A0A075B615 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Gm12366-201ENSMUST00000121722 873 ntBASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Gm5786-201ENSMUST00000085368 882 ntBASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4n-4A0A075B615 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4n-4A0A075B615 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms