Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm42778-201ENSMUST00000199644 553 ntBASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-1A0A075B5Z8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm38285-201ENSMUST00000192928 922 ntBASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-1A0A075B5Z8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-1A0A075B5Z8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-1A0A075B5Z8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-1A0A075B5Z8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trav6-1A0A075B5Z8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-1A0A075B5Z8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-1A0A075B5Z8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms