Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.14□□□□□ -1.59
Clrn1Q8K445 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.14□□□□□ -1.59
Clrn1Q8K445 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.14□□□□□ -1.59
Clrn1Q8K445 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Clrn1Q8K445 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm12492-201ENSMUST00000117665 564 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm12641-201ENSMUST00000117874 985 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm12267-201ENSMUST00000121609 761 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm20519-201ENSMUST00000173684 359 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Mir3572-201ENSMUST00000175549 86 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm9892-201ENSMUST00000182415 992 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm27957-201ENSMUST00000184054 127 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm28779-201ENSMUST00000189678 323 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm38329-201ENSMUST00000193473 427 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm43444-201ENSMUST00000198123 291 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm5284-201ENSMUST00000199053 903 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm45673-201ENSMUST00000210293 358 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm6362-201ENSMUST00000217686 836 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm3565-201ENSMUST00000222670 609 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Clrn1Q8K445 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.13□□□□□ -1.59
Clrn1Q8K445 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Clrn1Q8K445 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Clrn1Q8K445 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Clrn1Q8K445 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Clrn1Q8K445 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Clrn1Q8K445 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm22592-201ENSMUST00000104242 131 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm25315-201ENSMUST00000116823 121 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm7974-201ENSMUST00000117154 408 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm13806-201ENSMUST00000117822 325 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm15531-201ENSMUST00000118062 252 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm13454-201ENSMUST00000118166 483 ntBASIC5.12□□□□□ -1.59
Clrn1Q8K445 Gm14793-201ENSMUST00000118739 311 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms