Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm12993-201ENSMUST00000119900 479 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm15049-201ENSMUST00000120474 463 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm13677-201ENSMUST00000120739 595 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm11679-201ENSMUST00000121830 779 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm26489-201ENSMUST00000157880 264 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm28864-201ENSMUST00000189251 644 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm43583-201ENSMUST00000199235 303 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm44030-201ENSMUST00000204865 432 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm45778-201ENSMUST00000211959 153 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 AC113031.3-201ENSMUST00000226552 190 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm22685-201ENSMUST00000082848 106 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm12010-201ENSMUST00000122400 2017 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm15578-201ENSMUST00000117320 475 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm13921-201ENSMUST00000119411 463 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm10913-201ENSMUST00000133732 463 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm24015-201ENSMUST00000157725 232 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm25717-201ENSMUST00000158631 353 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm3121-201ENSMUST00000187086 406 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm28728-201ENSMUST00000189087 405 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm42484-201ENSMUST00000196075 2104 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm43828-201ENSMUST00000196890 639 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm42558-201ENSMUST00000200982 265 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm43008-201ENSMUST00000202346 286 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm19126-201ENSMUST00000207896 509 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm45299-201ENSMUST00000210199 420 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm39147-201ENSMUST00000211376 465 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 CT010506.3-201ENSMUST00000223699 410 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm22683-201ENSMUST00000082854 137 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm24046-201ENSMUST00000083111 165 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.68□□□□□ -1.18
Trim35Q8C006 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim35Q8C006 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim35Q8C006 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm15603-201ENSMUST00000119252 492 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm14591-201ENSMUST00000120407 518 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm14749-201ENSMUST00000121269 333 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm13009-201ENSMUST00000121307 267 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm23000-201ENSMUST00000157083 139 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms