Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm19029-201ENSMUST00000189923 564 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm4734-201ENSMUST00000200117 777 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm43914-201ENSMUST00000203592 594 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm45870-201ENSMUST00000211269 601 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC162931.1-201ENSMUST00000214184 267 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm22265-201ENSMUST00000082947 116 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm24316-201ENSMUST00000083041 107 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Trim47Q8C0E3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Trim47Q8C0E3 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm11284-201ENSMUST00000121910 1887 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm23739-201ENSMUST00000102295 108 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm14558-201ENSMUST00000117458 381 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm13866-201ENSMUST00000118901 968 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm14605-201ENSMUST00000120599 268 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm13998-201ENSMUST00000120952 335 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm22214-201ENSMUST00000157563 172 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm25454-201ENSMUST00000157947 315 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm25671-201ENSMUST00000178612 105 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm25314-201ENSMUST00000178810 79 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm23307-201ENSMUST00000179167 105 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm25286-201ENSMUST00000179790 105 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Mir7235-201ENSMUST00000183796 56 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Mir7653-201ENSMUST00000184358 61 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm28188-201ENSMUST00000190483 236 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm44360-201ENSMUST00000200081 82 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm2676-201ENSMUST00000207279 606 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm8863-201ENSMUST00000216630 926 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 CR974429.1-201ENSMUST00000220877 827 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 AV026068-216ENSMUST00000223874 328 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm10222-201ENSMUST00000088336 294 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim47Q8C0E3 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm24265-201ENSMUST00000101833 141 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm13717-201ENSMUST00000119868 365 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm15781-201ENSMUST00000120216 323 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm23792-201ENSMUST00000122557 93 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm24359-201ENSMUST00000158418 221 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm3030-201ENSMUST00000163410 516 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm17538-201ENSMUST00000168236 327 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm23162-201ENSMUST00000175081 121 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms