Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne3Q4FZC9 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.58□□□□□ -1.52
Syne3Q4FZC9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne3Q4FZC9 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne3Q4FZC9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne3Q4FZC9 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.58□□□□□ -1.52
Syne3Q4FZC9 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm7189-201ENSMUST00000119811 429 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm26489-201ENSMUST00000157880 264 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm22158-201ENSMUST00000158411 126 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm23505-201ENSMUST00000158989 130 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm3496-201ENSMUST00000188283 745 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm28467-201ENSMUST00000190981 318 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm43554-201ENSMUST00000199987 186 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm44307-201ENSMUST00000204466 764 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm44074-201ENSMUST00000204562 337 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm29817-201ENSMUST00000210098 172 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm4263-202ENSMUST00000221392 667 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm8724-201ENSMUST00000081668 483 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm23623-201ENSMUST00000082461 107 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Syne3Q4FZC9 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm13503-201ENSMUST00000119017 446 ntBASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm5401-201ENSMUST00000122444 365 ntBASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm24211-201ENSMUST00000158264 107 ntBASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm17907-201ENSMUST00000173150 710 ntBASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.56□□□□□ -1.52
Syne3Q4FZC9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms