Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm28389-201ENSMUST00000190090 697 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm37961-201ENSMUST00000192729 299 ntBASIC4.48□□□□□ -1.69
Sox3P53784 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm45226-201ENSMUST00000206602 288 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm18462-201ENSMUST00000208112 417 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm7093-201ENSMUST00000223004 581 ntBASIC4.48□□□□□ -1.69
Sox3P53784 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
Sox3P53784 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm23464-201ENSMUST00000083145 147 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm23099-201ENSMUST00000083454 139 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Mir193a-201ENSMUST00000083461 66 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Sox3P53784 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Sox3P53784 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sox3P53784 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm12186-201ENSMUST00000119050 945 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Gm11931-201ENSMUST00000121630 447 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.47□□□□□ -1.69
Sox3P53784 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm29668-201ENSMUST00000187802 315 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Gm28803-201ENSMUST00000190385 764 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.47□□□□□ -1.69
Sox3P53784 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.47□□□□□ -1.69
Sox3P53784 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.47□□□□□ -1.69
Sox3P53784 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.47□□□□□ -1.69
Sox3P53784 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Snora52-201ENSMUST00000082732 137 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sox3P53784 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox3P53784 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.47□□□□□ -1.69
Sox3P53784 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sox3P53784 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox3P53784 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.46□□□□□ -1.69
Sox3P53784 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sox3P53784 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
Sox3P53784 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Sox3P53784 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sox3P53784 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm15752-201ENSMUST00000117427 394 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm13501-201ENSMUST00000118477 979 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm15166-201ENSMUST00000120790 385 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm22637-201ENSMUST00000158144 283 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sox3P53784 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm44402-201ENSMUST00000203677 238 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm43922-201ENSMUST00000205071 328 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.46□□□□□ -1.7
Sox3P53784 Gm18016-201ENSMUST00000216119 801 ntBASIC4.46□□□□□ -1.7
Sox3P53784 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.46□□□□□ -1.7
Sox3P53784 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.46□□□□□ -1.7
Sox3P53784 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sox3P53784 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms