Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.44□□□□□ -1.38
Sox18P43680 Gm22219-201ENSMUST00000157562 319 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm26162-201ENSMUST00000157793 132 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Sox18P43680 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.44□□□□□ -1.38
Sox18P43680 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.44□□□□□ -1.38
Sox18P43680 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Gm29475-201ENSMUST00000190767 312 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm22897-202ENSMUST00000197782 127 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Mir6906-201ENSMUST00000198998 58 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm44239-201ENSMUST00000204228 271 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm44074-201ENSMUST00000204562 337 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.44□□□□□ -1.38
Sox18P43680 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Sox18P43680 Gm17849-201ENSMUST00000219788 853 ntBASIC6.44□□□□□ -1.38
Sox18P43680 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Gm6056-201ENSMUST00000221253 488 ntBASIC6.44□□□□□ -1.38
Sox18P43680 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Sox18P43680 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Sox18P43680 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Sox18P43680 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Sox18P43680 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.44□□□□□ -1.38
Sox18P43680 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Sox18P43680 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.44□□□□□ -1.38
Sox18P43680 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sox18P43680 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox18P43680 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox18P43680 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 Gm20345-201ENSMUST00000175839 2414 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm23744-201ENSMUST00000104231 149 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm24889-201ENSMUST00000104388 132 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Mir466j-201ENSMUST00000116876 122 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm13983-201ENSMUST00000118018 865 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm14614-201ENSMUST00000119873 384 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Gm26101-201ENSMUST00000157246 105 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm22210-201ENSMUST00000158101 144 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm22538-201ENSMUST00000158169 299 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm22448-201ENSMUST00000179254 107 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox18P43680 Gm22307-201ENSMUST00000180019 107 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Mir6361-201ENSMUST00000185079 101 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm19641-201ENSMUST00000188432 417 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 Gm28620-201ENSMUST00000190463 439 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm20770-201ENSMUST00000193474 694 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Sox18P43680 Gm18100-201ENSMUST00000200897 452 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm43418-201ENSMUST00000201334 428 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm44513-201ENSMUST00000206811 439 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm44820-201ENSMUST00000207420 396 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm46203-201ENSMUST00000218130 478 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm4510-201ENSMUST00000218265 427 ntBASIC6.43□□□□□ -1.38
Sox18P43680 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.43□□□□□ -1.38
Sox18P43680 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm9800-201ENSMUST00000052615 336 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Snora23-201ENSMUST00000082517 184 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Snora44-201ENSMUST00000082670 129 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Sox18P43680 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Sox18P43680 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Sox18P43680 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.43□□□□□ -1.38
Sox18P43680 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox18P43680 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 170.8 ms