Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nubp1Q9R060 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nubp1Q9R060 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.33■□□□□ 0.05
Nubp1Q9R060 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Gm27704-201ENSMUST00000185094 107 ntBASIC15.33■□□□□ 0.04
Nubp1Q9R060 Gm38027-201ENSMUST00000192315 235 ntBASIC15.33■□□□□ 0.04
Nubp1Q9R060 Gm37319-201ENSMUST00000193500 636 ntBASIC15.33■□□□□ 0.04
Nubp1Q9R060 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.33■□□□□ 0.04
Nubp1Q9R060 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nubp1Q9R060 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Gm9013-201ENSMUST00000132939 882 ntBASIC15.32■□□□□ 0.04
Nubp1Q9R060 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.32■□□□□ 0.04
Nubp1Q9R060 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.32■□□□□ 0.04
Nubp1Q9R060 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nubp1Q9R060 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Gm5587-201ENSMUST00000206270 674 ntBASIC15.31■□□□□ 0.04
Nubp1Q9R060 Gm44771-201ENSMUST00000206975 626 ntBASIC15.31■□□□□ 0.04
Nubp1Q9R060 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.31■□□□□ 0.04
Nubp1Q9R060 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.31■□□□□ 0.04
Nubp1Q9R060 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nubp1Q9R060 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.3■□□□□ 0.04
Nubp1Q9R060 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nubp1Q9R060 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nubp1Q9R060 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nubp1Q9R060 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.29■□□□□ 0.04
Nubp1Q9R060 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.29■□□□□ 0.04
Nubp1Q9R060 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nubp1Q9R060 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.29■□□□□ 0.04
Nubp1Q9R060 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nubp1Q9R060 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.29■□□□□ 0.04
Nubp1Q9R060 Gm18958-201ENSMUST00000174258 762 ntBASIC15.29■□□□□ 0.04
Nubp1Q9R060 Gm17807-201ENSMUST00000186869 298 ntBASIC15.29■□□□□ 0.04
Nubp1Q9R060 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms