Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph9Q9D9V4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Rsph9Q9D9V4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph9Q9D9V4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Gm3375-201ENSMUST00000203929 796 ntBASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph9Q9D9V4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rsph9Q9D9V4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph9Q9D9V4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rsph9Q9D9V4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rsph9Q9D9V4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rsph9Q9D9V4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rsph9Q9D9V4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rsph9Q9D9V4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Gm10517-202ENSMUST00000192970 758 ntBASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rsph9Q9D9V4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms