Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mbd3l1Q9D9H3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mbd3l1Q9D9H3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mbd3l1Q9D9H3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mbd3l1Q9D9H3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms