Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Gm43173-201ENSMUST00000202246 593 ntBASIC17.59■□□□□ 0.41
Trim42Q9D2H5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim42Q9D2H5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim42Q9D2H5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim42Q9D2H5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim42Q9D2H5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim42Q9D2H5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim42Q9D2H5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Gm21956-201ENSMUST00000179946 522 ntBASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms