Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.2■□□□□ 0.34
Trim16Q99PP9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim16Q99PP9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim16Q99PP9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.18■□□□□ 0.34
Trim16Q99PP9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim16Q99PP9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim16Q99PP9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.16■□□□□ 0.34
Trim16Q99PP9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim16Q99PP9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim16Q99PP9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms