Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim33Q99PP7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim33Q99PP7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.39■□□□□ 0.38
Trim33Q99PP7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim33Q99PP7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim33Q99PP7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim33Q99PP7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim33Q99PP7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.38■□□□□ 0.37
Trim33Q99PP7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.38■□□□□ 0.37
Trim33Q99PP7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim33Q99PP7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim33Q99PP7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms