Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SncaipQ99ME3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.15■□□□□ 0.5
SncaipQ99ME3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.15■□□□□ 0.5
SncaipQ99ME3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SncaipQ99ME3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SncaipQ99ME3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SncaipQ99ME3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SncaipQ99ME3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SncaipQ99ME3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.13■□□□□ 0.49
SncaipQ99ME3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.13■□□□□ 0.49
SncaipQ99ME3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SncaipQ99ME3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.12■□□□□ 0.49
SncaipQ99ME3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SncaipQ99ME3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.11■□□□□ 0.49
SncaipQ99ME3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SncaipQ99ME3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.1■□□□□ 0.49
SncaipQ99ME3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.1■□□□□ 0.49
SncaipQ99ME3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.1■□□□□ 0.49
SncaipQ99ME3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SncaipQ99ME3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.09■□□□□ 0.49
SncaipQ99ME3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms