Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha3Q91Y16 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha3Q91Y16 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha3Q91Y16 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha3Q91Y16 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdha3Q91Y16 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Gm10698-201ENSMUST00000182663 604 ntBASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdha3Q91Y16 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdha3Q91Y16 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms