Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Idnk-204ENSMUST00000226010 1898 ntBASIC18.71■□□□□ 0.59
TraipQ8VIG6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TraipQ8VIG6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.7■□□□□ 0.58
TraipQ8VIG6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TraipQ8VIG6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TraipQ8VIG6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.69■□□□□ 0.58
TraipQ8VIG6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.69■□□□□ 0.58
TraipQ8VIG6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Golph3-205ENSMUST00000228671 2842 ntBASIC18.68■□□□□ 0.58
TraipQ8VIG6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TraipQ8VIG6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.67■□□□□ 0.58
TraipQ8VIG6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TraipQ8VIG6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.67■□□□□ 0.58
TraipQ8VIG6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TraipQ8VIG6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms