Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg4Q8VHY0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Gm27702-201ENSMUST00000184512 56 ntBASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Gm27742-201ENSMUST00000184667 60 ntBASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cspg4Q8VHY0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cspg4Q8VHY0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.08■□□□□ 0
Cspg4Q8VHY0 Gm7213-201ENSMUST00000215977 950 ntBASIC15.08■□□□□ 0
Cspg4Q8VHY0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cspg4Q8VHY0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.08■□□□□ 0
Cspg4Q8VHY0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.08■□□□□ 0
Cspg4Q8VHY0 Gm10576-201ENSMUST00000191927 825 ntBASIC15.08■□□□□ 0
Cspg4Q8VHY0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.07■□□□□ 0
Cspg4Q8VHY0 Olfr129-201ENSMUST00000122318 993 ntBASIC15.07■□□□□ 0
Cspg4Q8VHY0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg4Q8VHY0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Golph3-205ENSMUST00000228671 2842 ntBASIC15.06■□□□□ 0
Cspg4Q8VHY0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Gm13884-201ENSMUST00000118103 829 ntBASIC15.06■□□□□ 0
Cspg4Q8VHY0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.06■□□□□ 0
Cspg4Q8VHY0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Gm10418-201ENSMUST00000100943 576 ntBASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms