Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vps4aQ8VEJ9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps4aQ8VEJ9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4aQ8VEJ9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Vps4aQ8VEJ9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4aQ8VEJ9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Gm12896-201ENSMUST00000118430 226 ntBASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Gm27275-201ENSMUST00000184318 272 ntBASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms