Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkd2Q8VE28 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkd2Q8VE28 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkd2Q8VE28 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkd2Q8VE28 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Gm10698-201ENSMUST00000182663 604 ntBASIC16.03■□□□□ 0.16
Nkd2Q8VE28 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nkd2Q8VE28 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Mir1199-201ENSMUST00000117015 119 ntBASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nkd2Q8VE28 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nkd2Q8VE28 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.01■□□□□ 0.15
Nkd2Q8VE28 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nkd2Q8VE28 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nkd2Q8VE28 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16■□□□□ 0.15
Nkd2Q8VE28 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms