Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm1Q8VC85 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Gm11927-201ENSMUST00000118472 759 ntBASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm1Q8VC85 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm1Q8VC85 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lsm1Q8VC85 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lsm1Q8VC85 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms