Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Ddx54Q8K4L0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 AC122351.1-201ENSMUST00000220467 126 ntBASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ddx54Q8K4L0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC23.02■■□□□ 1.28
Ddx54Q8K4L0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Gm2651-201ENSMUST00000203560 838 ntBASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx54Q8K4L0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx54Q8K4L0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23■■□□□ 1.27
Ddx54Q8K4L0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Gm11594-201ENSMUST00000122313 162 ntBASIC23■■□□□ 1.27
Ddx54Q8K4L0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx54Q8K4L0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 AC153889.1-201ENSMUST00000219257 330 ntBASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx54Q8K4L0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Gm9449-201ENSMUST00000207265 1011 ntBASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ddx54Q8K4L0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ddx54Q8K4L0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Gm29791-202ENSMUST00000207888 369 ntBASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms