Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gm27405-201ENSMUST00000184201 112 ntBASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gm42642-201ENSMUST00000200683 355 ntBASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gm32699-201ENSMUST00000221728 1988 ntBASIC11.04□□□□□ -0.64
Cystm1Q8K353 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.04□□□□□ -0.64
Cystm1Q8K353 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cystm1Q8K353 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.03□□□□□ -0.64
Cystm1Q8K353 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.03□□□□□ -0.64
Cystm1Q8K353 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cystm1Q8K353 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cystm1Q8K353 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm27801-201ENSMUST00000184174 223 ntBASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm7291-201ENSMUST00000199147 382 ntBASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm18671-201ENSMUST00000214826 683 ntBASIC11.02□□□□□ -0.65
Cystm1Q8K353 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cystm1Q8K353 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms