Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Rab43Q8CG50 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.14■□□□□ 0.34
Rab43Q8CG50 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rab43Q8CG50 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Gm13474-201ENSMUST00000122466 815 ntBASIC17.14■□□□□ 0.33
Rab43Q8CG50 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab43Q8CG50 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Gm33142-201ENSMUST00000193913 867 ntBASIC17.13■□□□□ 0.33
Rab43Q8CG50 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab43Q8CG50 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rab43Q8CG50 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab43Q8CG50 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.11■□□□□ 0.33
Rab43Q8CG50 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Gm7791-201ENSMUST00000219066 539 ntBASIC17.11■□□□□ 0.33
Rab43Q8CG50 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.11■□□□□ 0.33
Rab43Q8CG50 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab43Q8CG50 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab43Q8CG50 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.09■□□□□ 0.33
Rab43Q8CG50 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.09■□□□□ 0.33
Rab43Q8CG50 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab43Q8CG50 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms