Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim9Q8C7M3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.41■□□□□ 0.7
Trim9Q8C7M3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim9Q8C7M3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Gm5643-201ENSMUST00000117081 966 ntBASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim9Q8C7M3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim9Q8C7M3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim9Q8C7M3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim9Q8C7M3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim9Q8C7M3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Gm37292-201ENSMUST00000192062 758 ntBASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim9Q8C7M3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim9Q8C7M3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim9Q8C7M3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms