Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.44■□□□□ 0.22
Cpne1Q8C166 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Gm8520-201ENSMUST00000186517 868 ntBASIC16.43■□□□□ 0.22
Cpne1Q8C166 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cpne1Q8C166 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.43■□□□□ 0.22
Cpne1Q8C166 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne1Q8C166 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Mir6349-201ENSMUST00000184059 97 ntBASIC16.42■□□□□ 0.22
Cpne1Q8C166 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.42■□□□□ 0.22
Cpne1Q8C166 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Cpne1Q8C166 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.41■□□□□ 0.22
Cpne1Q8C166 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Gm8969-201ENSMUST00000199694 526 ntBASIC16.41■□□□□ 0.22
Cpne1Q8C166 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne1Q8C166 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne1Q8C166 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.4■□□□□ 0.22
Cpne1Q8C166 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Gm22240-201ENSMUST00000175225 82 ntBASIC16.39■□□□□ 0.21
Cpne1Q8C166 Gm42545-201ENSMUST00000202755 922 ntBASIC16.39■□□□□ 0.21
Cpne1Q8C166 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne1Q8C166 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.38■□□□□ 0.21
Cpne1Q8C166 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne1Q8C166 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms