Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim47Q8C0E3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim47Q8C0E3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.49■□□□□ 0.71
Trim47Q8C0E3 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim47Q8C0E3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim47Q8C0E3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim47Q8C0E3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Gm30025-201ENSMUST00000218555 728 ntBASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Trim47Q8C0E3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Gm38027-201ENSMUST00000192315 235 ntBASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim47Q8C0E3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Gm43799-201ENSMUST00000201845 579 ntBASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim47Q8C0E3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Trim47Q8C0E3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim47Q8C0E3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim47Q8C0E3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim47Q8C0E3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim47Q8C0E3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.43■□□□□ 0.7
Trim47Q8C0E3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms