Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Gm42545-201ENSMUST00000202755 922 ntBASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sfr1Q8BP27 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Fst-202ENSMUST00000223640 2612 ntBASIC17.84■□□□□ 0.45
Sfr1Q8BP27 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sfr1Q8BP27 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.83■□□□□ 0.44
Sfr1Q8BP27 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Gm43183-201ENSMUST00000200632 547 ntBASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sfr1Q8BP27 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Gm37292-201ENSMUST00000192062 758 ntBASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sfr1Q8BP27 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Gm12382-201ENSMUST00000122005 922 ntBASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms