Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Csnk1a1Q8BK63 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Mir2861-201ENSMUST00000175539 82 ntBASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Trmt13-210ENSMUST00000198454 880 ntBASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Gm29791-202ENSMUST00000207888 369 ntBASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.65■□□□□ 0.1
Csnk1a1Q8BK63 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Gm12527-201ENSMUST00000117967 564 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Gm15375-201ENSMUST00000119510 849 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Mir6349-201ENSMUST00000184059 97 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Gm37856-201ENSMUST00000191634 999 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Idnk-204ENSMUST00000226010 1898 ntBASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csnk1a1Q8BK63 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csnk1a1Q8BK63 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Gm18666-201ENSMUST00000190039 958 ntBASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.62■□□□□ 0.09
Csnk1a1Q8BK63 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Csnk1a1Q8BK63 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Csnk1a1Q8BK63 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Csnk1a1Q8BK63 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Csnk1a1Q8BK63 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Csnk1a1Q8BK63 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms