Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Slc5a7Q8BGY9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.43■□□□□ 0.06
Slc5a7Q8BGY9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.42■□□□□ 0.06
Slc5a7Q8BGY9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Rps24-207ENSMUST00000224568 714 ntBASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc5a7Q8BGY9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc5a7Q8BGY9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc5a7Q8BGY9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc5a7Q8BGY9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc5a7Q8BGY9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc5a7Q8BGY9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms