Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Gm23634-201ENSMUST00000175071 91 ntBASIC13.48□□□□□ -0.25
Notch3Q61982 Gm3375-201ENSMUST00000203929 796 ntBASIC13.48□□□□□ -0.25
Notch3Q61982 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Notch3Q61982 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Notch3Q61982 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Notch3Q61982 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.47□□□□□ -0.25
Notch3Q61982 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Notch3Q61982 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Notch3Q61982 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Notch3Q61982 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.46□□□□□ -0.25
Notch3Q61982 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Notch3Q61982 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Notch3Q61982 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Notch3Q61982 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Notch3Q61982 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Notch3Q61982 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.46□□□□□ -0.25
Notch3Q61982 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.46□□□□□ -0.25
Notch3Q61982 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Notch3Q61982 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Notch3Q61982 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Notch3Q61982 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Notch3Q61982 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Notch3Q61982 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Notch3Q61982 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Notch3Q61982 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Notch3Q61982 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.45□□□□□ -0.26
Notch3Q61982 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Notch3Q61982 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Notch3Q61982 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Notch3Q61982 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Notch3Q61982 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.45□□□□□ -0.26
Notch3Q61982 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Notch3Q61982 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Notch3Q61982 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.44□□□□□ -0.26
Notch3Q61982 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Notch3Q61982 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.44□□□□□ -0.26
Notch3Q61982 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Notch3Q61982 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Notch3Q61982 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms