Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.34■□□□□ 0.53
Smarcd1Q61466 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Mir7071-201ENSMUST00000184847 69 ntBASIC18.34■□□□□ 0.53
Smarcd1Q61466 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd1Q61466 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.33■□□□□ 0.53
Smarcd1Q61466 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd1Q61466 Gm38027-201ENSMUST00000192315 235 ntBASIC18.33■□□□□ 0.52
Smarcd1Q61466 Gm30025-201ENSMUST00000218555 728 ntBASIC18.33■□□□□ 0.52
Smarcd1Q61466 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smarcd1Q61466 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd1Q61466 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd1Q61466 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd1Q61466 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Gm24841-201ENSMUST00000158676 357 ntBASIC18.32■□□□□ 0.52
Smarcd1Q61466 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd1Q61466 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smarcd1Q61466 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Mir8112-201ENSMUST00000184382 131 ntBASIC18.31■□□□□ 0.52
Smarcd1Q61466 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.31■□□□□ 0.52
Smarcd1Q61466 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smarcd1Q61466 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcd1Q61466 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd1Q61466 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms