Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.16■□□□□ 0.18
Urb1Q571H0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.16■□□□□ 0.18
Urb1Q571H0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Urb1Q571H0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Urb1Q571H0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
Urb1Q571H0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Urb1Q571H0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.15■□□□□ 0.18
Urb1Q571H0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.15■□□□□ 0.18
Urb1Q571H0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.15■□□□□ 0.18
Urb1Q571H0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.15■□□□□ 0.18
Urb1Q571H0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Urb1Q571H0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.14■□□□□ 0.18
Urb1Q571H0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Urb1Q571H0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.14■□□□□ 0.17
Urb1Q571H0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Urb1Q571H0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Urb1Q571H0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Urb1Q571H0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Urb1Q571H0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.12■□□□□ 0.17
Urb1Q571H0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.12■□□□□ 0.17
Urb1Q571H0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.12■□□□□ 0.17
Urb1Q571H0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.12■□□□□ 0.17
Urb1Q571H0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Urb1Q571H0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Urb1Q571H0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Urb1Q571H0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Urb1Q571H0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Gm7638-201ENSMUST00000121348 967 ntBASIC16.11■□□□□ 0.17
Urb1Q571H0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Urb1Q571H0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.11■□□□□ 0.17
Urb1Q571H0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Urb1Q571H0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.1■□□□□ 0.17
Urb1Q571H0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms