Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Gm18101-201ENSMUST00000215769 548 ntBASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Spg7Q3ULF4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Gm22697-201ENSMUST00000175194 63 ntBASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg7Q3ULF4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Gm9731-201ENSMUST00000209480 747 ntBASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg7Q3ULF4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Spg7Q3ULF4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Il3ra-202ENSMUST00000223589 738 ntBASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Fst-202ENSMUST00000223640 2612 ntBASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Spg7Q3ULF4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 AA414768-201ENSMUST00000121924 1257 ntBASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Spg7Q3ULF4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Gm21362-201ENSMUST00000194272 928 ntBASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg7Q3ULF4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Spg7Q3ULF4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Spg7Q3ULF4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms