Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Mir8112-201ENSMUST00000184382 131 ntBASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Gm2274-201ENSMUST00000184539 609 ntBASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Snx27Q3UHD6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Snx27Q3UHD6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Snx27Q3UHD6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Snx27Q3UHD6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Snx27Q3UHD6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Snx27Q3UHD6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.01■□□□□ 0.63
Snx27Q3UHD6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Snx27Q3UHD6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19■□□□□ 0.63
Snx27Q3UHD6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19■□□□□ 0.63
Snx27Q3UHD6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Snx27Q3UHD6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19■□□□□ 0.63
Snx27Q3UHD6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Gm37025-201ENSMUST00000195159 829 ntBASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Snx27Q3UHD6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Mir5130-201ENSMUST00000175160 84 ntBASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Gm9731-201ENSMUST00000209480 747 ntBASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Snx27Q3UHD6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Gm18032-201ENSMUST00000222541 538 ntBASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snx27Q3UHD6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snx27Q3UHD6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Snx27Q3UHD6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms