Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.84■□□□□ 0.45
Cdh6P97326 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh6P97326 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh6P97326 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cdh6P97326 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh6P97326 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.83■□□□□ 0.44
Cdh6P97326 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdh6P97326 Gm22240-201ENSMUST00000175225 82 ntBASIC17.83■□□□□ 0.44
Cdh6P97326 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdh6P97326 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdh6P97326 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cdh6P97326 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh6P97326 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.82■□□□□ 0.44
Cdh6P97326 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh6P97326 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdh6P97326 Mir8112-201ENSMUST00000184382 131 ntBASIC17.82■□□□□ 0.44
Cdh6P97326 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdh6P97326 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh6P97326 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdh6P97326 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh6P97326 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh6P97326 Rarb-207ENSMUST00000225921 2756 ntBASIC17.81■□□□□ 0.44
Cdh6P97326 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh6P97326 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh6P97326 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdh6P97326 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh6P97326 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh6P97326 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdh6P97326 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh6P97326 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh6P97326 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh6P97326 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh6P97326 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.78■□□□□ 0.44
Cdh6P97326 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdh6P97326 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cdh6P97326 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.78■□□□□ 0.44
Cdh6P97326 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh6P97326 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms