Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.36■□□□□ 0.37
SgcgP82348 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.35■□□□□ 0.37
SgcgP82348 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.35■□□□□ 0.37
SgcgP82348 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SgcgP82348 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SgcgP82348 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SgcgP82348 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SgcgP82348 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SgcgP82348 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SgcgP82348 Gm4974-201ENSMUST00000209974 875 ntBASIC17.34■□□□□ 0.37
SgcgP82348 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SgcgP82348 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcgP82348 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcgP82348 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcgP82348 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SgcgP82348 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SgcgP82348 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.33■□□□□ 0.36
SgcgP82348 Gm10231-201ENSMUST00000181584 441 ntBASIC17.33■□□□□ 0.36
SgcgP82348 Gm7889-201ENSMUST00000185591 958 ntBASIC17.33■□□□□ 0.36
SgcgP82348 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.33■□□□□ 0.36
SgcgP82348 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Gm29791-202ENSMUST00000207888 369 ntBASIC17.33■□□□□ 0.36
SgcgP82348 Gm10175-202ENSMUST00000208752 441 ntBASIC17.33■□□□□ 0.36
SgcgP82348 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.33■□□□□ 0.36
SgcgP82348 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.33■□□□□ 0.36
SgcgP82348 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.33■□□□□ 0.36
SgcgP82348 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SgcgP82348 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcgP82348 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.32■□□□□ 0.36
SgcgP82348 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SgcgP82348 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SgcgP82348 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcgP82348 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.32■□□□□ 0.36
SgcgP82348 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.32■□□□□ 0.36
SgcgP82348 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.31■□□□□ 0.36
SgcgP82348 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SgcgP82348 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SgcgP82348 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SgcgP82348 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.31■□□□□ 0.36
SgcgP82348 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms