Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.39□□□□□ -0.11
Timp3P39876 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Timp3P39876 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Timp3P39876 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.39□□□□□ -0.11
Timp3P39876 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Timp3P39876 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.39□□□□□ -0.11
Timp3P39876 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Timp3P39876 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timp3P39876 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.39□□□□□ -0.11
Timp3P39876 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Timp3P39876 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Gm15375-201ENSMUST00000119510 849 ntBASIC14.38□□□□□ -0.11
Timp3P39876 Mir6349-201ENSMUST00000184059 97 ntBASIC14.38□□□□□ -0.11
Timp3P39876 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.38□□□□□ -0.11
Timp3P39876 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.38□□□□□ -0.11
Timp3P39876 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.38□□□□□ -0.11
Timp3P39876 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timp3P39876 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.37□□□□□ -0.11
Timp3P39876 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Timp3P39876 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.37□□□□□ -0.11
Timp3P39876 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.37□□□□□ -0.11
Timp3P39876 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.37□□□□□ -0.11
Timp3P39876 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Timp3P39876 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timp3P39876 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.36□□□□□ -0.11
Timp3P39876 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.36□□□□□ -0.11
Timp3P39876 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.36□□□□□ -0.11
Timp3P39876 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.36□□□□□ -0.11
Timp3P39876 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.36□□□□□ -0.11
Timp3P39876 Gm37055-201ENSMUST00000191866 133 ntBASIC14.36□□□□□ -0.11
Timp3P39876 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Mtag2-201ENSMUST00000058665 714 ntBASIC14.36□□□□□ -0.11
Timp3P39876 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timp3P39876 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.35□□□□□ -0.11
Timp3P39876 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Timp3P39876 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Timp3P39876 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Timp3P39876 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.35□□□□□ -0.11
Timp3P39876 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Timp3P39876 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.35□□□□□ -0.11
Timp3P39876 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.35□□□□□ -0.11
Timp3P39876 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.34□□□□□ -0.11
Timp3P39876 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Timp3P39876 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Timp3P39876 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 278.3 ms