Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn1aP39689 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cdkn1aP39689 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdkn1aP39689 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Gm9987-201ENSMUST00000069768 567 ntBASIC14.52□□□□□ -0.09
Cdkn1aP39689 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn1aP39689 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn1aP39689 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.5□□□□□ -0.09
Cdkn1aP39689 Gm11539-201ENSMUST00000119837 557 ntBASIC14.5□□□□□ -0.09
Cdkn1aP39689 Gm13436-201ENSMUST00000120418 567 ntBASIC14.5□□□□□ -0.09
Cdkn1aP39689 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.5□□□□□ -0.09
Cdkn1aP39689 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn1aP39689 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.49□□□□□ -0.09
Cdkn1aP39689 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.49□□□□□ -0.09
Cdkn1aP39689 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Gm6433-201ENSMUST00000118634 875 ntBASIC14.49□□□□□ -0.09
Cdkn1aP39689 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms