Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.81■□□□□ 0.28
Cdh4P39038 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.81■□□□□ 0.28
Cdh4P39038 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cdh4P39038 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.81■□□□□ 0.28
Cdh4P39038 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdh4P39038 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.81■□□□□ 0.28
Cdh4P39038 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cdh4P39038 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh4P39038 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdh4P39038 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Gm29791-202ENSMUST00000207888 369 ntBASIC16.8■□□□□ 0.28
Cdh4P39038 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdh4P39038 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.8■□□□□ 0.28
Cdh4P39038 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.8■□□□□ 0.28
Cdh4P39038 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdh4P39038 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Cdh4P39038 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdh4P39038 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh4P39038 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cdh4P39038 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh4P39038 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh4P39038 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh4P39038 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Cdh4P39038 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.78■□□□□ 0.28
Cdh4P39038 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cdh4P39038 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh4P39038 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdh4P39038 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cdh4P39038 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh4P39038 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.77■□□□□ 0.28
Cdh4P39038 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh4P39038 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh4P39038 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms