Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.47■□□□□ 0.71
RarbP22605 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.47■□□□□ 0.71
RarbP22605 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.47■□□□□ 0.71
RarbP22605 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RarbP22605 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
RarbP22605 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Gm9013-201ENSMUST00000132939 882 ntBASIC19.46■□□□□ 0.71
RarbP22605 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.46■□□□□ 0.71
RarbP22605 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.46■□□□□ 0.71
RarbP22605 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.46■□□□□ 0.71
RarbP22605 Gm17971-201ENSMUST00000190239 806 ntBASIC19.46■□□□□ 0.71
RarbP22605 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.46■□□□□ 0.71
RarbP22605 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.46■□□□□ 0.71
RarbP22605 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RarbP22605 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.45■□□□□ 0.7
RarbP22605 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.45■□□□□ 0.7
RarbP22605 Mir1668-201ENSMUST00000184114 107 ntBASIC19.45■□□□□ 0.7
RarbP22605 Gm7370-201ENSMUST00000219471 767 ntBASIC19.45■□□□□ 0.7
RarbP22605 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.45■□□□□ 0.7
RarbP22605 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RarbP22605 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.45■□□□□ 0.7
RarbP22605 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RarbP22605 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.44■□□□□ 0.7
RarbP22605 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.44■□□□□ 0.7
RarbP22605 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RarbP22605 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.44■□□□□ 0.7
RarbP22605 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RarbP22605 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RarbP22605 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.43■□□□□ 0.7
RarbP22605 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RarbP22605 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RarbP22605 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.43■□□□□ 0.7
RarbP22605 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RarbP22605 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Gm13401-201ENSMUST00000117074 291 ntBASIC19.42■□□□□ 0.7
RarbP22605 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.42■□□□□ 0.7
RarbP22605 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RarbP22605 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RarbP22605 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.41■□□□□ 0.7
RarbP22605 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RarbP22605 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RarbP22605 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RarbP22605 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.41■□□□□ 0.7
RarbP22605 Gm29518-201ENSMUST00000190858 372 ntBASIC19.41■□□□□ 0.7
RarbP22605 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RarbP22605 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RarbP22605 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms