Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.03■□□□□ 0.64
RaraP11416 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RaraP11416 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RaraP11416 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RaraP11416 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RaraP11416 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RaraP11416 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Mir8112-201ENSMUST00000184382 131 ntBASIC19.02■□□□□ 0.64
RaraP11416 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.02■□□□□ 0.64
RaraP11416 Rab3c-203ENSMUST00000224180 967 ntBASIC19.02■□□□□ 0.64
RaraP11416 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RaraP11416 Flg-201ENSMUST00000050758 1488 ntBASIC19.02■□□□□ 0.63
RaraP11416 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RaraP11416 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.01■□□□□ 0.63
RaraP11416 Gm27405-201ENSMUST00000184201 112 ntBASIC19.01■□□□□ 0.63
RaraP11416 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RaraP11416 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RaraP11416 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19■□□□□ 0.63
RaraP11416 Gm11927-201ENSMUST00000118472 759 ntBASIC19■□□□□ 0.63
RaraP11416 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19■□□□□ 0.63
RaraP11416 Mir2861-201ENSMUST00000175539 82 ntBASIC19■□□□□ 0.63
RaraP11416 Mtag2-201ENSMUST00000058665 714 ntBASIC19■□□□□ 0.63
RaraP11416 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19■□□□□ 0.63
RaraP11416 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RaraP11416 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
RaraP11416 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.99■□□□□ 0.63
RaraP11416 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RaraP11416 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Mir5133-201ENSMUST00000174955 77 ntBASIC18.99■□□□□ 0.63
RaraP11416 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RaraP11416 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RaraP11416 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RaraP11416 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RaraP11416 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RaraP11416 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RaraP11416 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.98■□□□□ 0.63
RaraP11416 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms