Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccl1P10146 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Ccl1P10146 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl1P10146 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
Ccl1P10146 Golgb1-201ENSMUST00000023534 498 ntBASIC13.7□□□□□ -0.22
Ccl1P10146 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccl1P10146 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccl1P10146 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccl1P10146 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Ccl1P10146 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccl1P10146 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl1P10146 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccl1P10146 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccl1P10146 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccl1P10146 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccl1P10146 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl1P10146 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.68□□□□□ -0.22
Ccl1P10146 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccl1P10146 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccl1P10146 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl1P10146 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccl1P10146 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccl1P10146 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccl1P10146 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccl1P10146 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccl1P10146 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl1P10146 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms