Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.46□□□□□ -0.41
Hbb-b1P02088 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hbb-b1P02088 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hbb-b1P02088 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.45□□□□□ -0.42
Hbb-b1P02088 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.45□□□□□ -0.42
Hbb-b1P02088 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hbb-b1P02088 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hbb-b1P02088 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hbb-b1P02088 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms