Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abcd4O89016 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Abcd4O89016 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Abcd4O89016 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Abcd4O89016 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abcd4O89016 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Abcd4O89016 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Abcd4O89016 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.9■□□□□ 0.14
Abcd4O89016 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Abcd4O89016 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Abcd4O89016 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Abcd4O89016 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Abcd4O89016 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.89■□□□□ 0.13
Abcd4O89016 Gm18025-201ENSMUST00000221733 862 ntBASIC15.89■□□□□ 0.13
Abcd4O89016 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.89■□□□□ 0.13
Abcd4O89016 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.89■□□□□ 0.13
Abcd4O89016 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Abcd4O89016 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.88■□□□□ 0.13
Abcd4O89016 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Abcd4O89016 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Gm12382-201ENSMUST00000122005 922 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 Mir5122-201ENSMUST00000175004 89 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.88■□□□□ 0.13
Abcd4O89016 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Abcd4O89016 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.88■□□□□ 0.13
Abcd4O89016 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Abcd4O89016 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Abcd4O89016 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.87■□□□□ 0.13
Abcd4O89016 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Abcd4O89016 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Abcd4O89016 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
Abcd4O89016 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.87■□□□□ 0.13
Abcd4O89016 Gm15565-201ENSMUST00000118890 427 ntBASIC15.87■□□□□ 0.13
Abcd4O89016 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.87■□□□□ 0.13
Abcd4O89016 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.87■□□□□ 0.13
Abcd4O89016 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Gm43183-201ENSMUST00000200632 547 ntBASIC15.87■□□□□ 0.13
Abcd4O89016 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.87■□□□□ 0.13
Abcd4O89016 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.87■□□□□ 0.13
Abcd4O89016 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Abcd4O89016 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.87■□□□□ 0.13
Abcd4O89016 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Abcd4O89016 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Abcd4O89016 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Abcd4O89016 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Abcd4O89016 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Abcd4O89016 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.86■□□□□ 0.13
Abcd4O89016 Mir6349-201ENSMUST00000184059 97 ntBASIC15.86■□□□□ 0.13
Abcd4O89016 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.86■□□□□ 0.13
Abcd4O89016 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.86■□□□□ 0.13
Abcd4O89016 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.86■□□□□ 0.13
Abcd4O89016 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Abcd4O89016 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Abcd4O89016 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.86■□□□□ 0.13
Abcd4O89016 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Abcd4O89016 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abcd4O89016 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abcd4O89016 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abcd4O89016 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abcd4O89016 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms