Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hdac3O88895 Gm13148-201ENSMUST00000118892 745 ntBASIC15.73■□□□□ 0.11
Hdac3O88895 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hdac3O88895 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hdac3O88895 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hdac3O88895 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Hdac3O88895 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hdac3O88895 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.72■□□□□ 0.11
Hdac3O88895 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Gm10602-201ENSMUST00000098239 609 ntBASIC15.72■□□□□ 0.11
Hdac3O88895 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hdac3O88895 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hdac3O88895 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hdac3O88895 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.71■□□□□ 0.11
Hdac3O88895 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.71■□□□□ 0.11
Hdac3O88895 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.71■□□□□ 0.11
Hdac3O88895 Rab3c-203ENSMUST00000224180 967 ntBASIC15.71■□□□□ 0.11
Hdac3O88895 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hdac3O88895 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hdac3O88895 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hdac3O88895 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hdac3O88895 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.71■□□□□ 0.1
Hdac3O88895 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hdac3O88895 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Hdac3O88895 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hdac3O88895 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Gm44549-201ENSMUST00000208351 577 ntBASIC15.7■□□□□ 0.1
Hdac3O88895 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hdac3O88895 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hdac3O88895 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hdac3O88895 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hdac3O88895 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hdac3O88895 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Hdac3O88895 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac3O88895 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hdac3O88895 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac3O88895 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Gm26524-201ENSMUST00000192339 390 ntBASIC15.69■□□□□ 0.1
Hdac3O88895 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.69■□□□□ 0.1
Hdac3O88895 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Hdac3O88895 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hdac3O88895 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms