Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sh2d1aO88890 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.44□□□□□ -0.42
Sh2d1aO88890 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh2d1aO88890 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh2d1aO88890 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Gm37179-201ENSMUST00000194862 823 ntBASIC12.43□□□□□ -0.42
Sh2d1aO88890 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh2d1aO88890 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.42□□□□□ -0.42
Sh2d1aO88890 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Gm13148-201ENSMUST00000118892 745 ntBASIC12.42□□□□□ -0.42
Sh2d1aO88890 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sh2d1aO88890 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.42□□□□□ -0.42
Sh2d1aO88890 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sh2d1aO88890 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.41□□□□□ -0.42
Sh2d1aO88890 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sh2d1aO88890 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms