Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.26■□□□□ 0.19
Cops4O88544 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.26■□□□□ 0.19
Cops4O88544 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.26■□□□□ 0.19
Cops4O88544 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Reep4-203ENSMUST00000226563 1444 ntBASIC16.26■□□□□ 0.19
Cops4O88544 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cops4O88544 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cops4O88544 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cops4O88544 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cops4O88544 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.25■□□□□ 0.19
Cops4O88544 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cops4O88544 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.24■□□□□ 0.19
Cops4O88544 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.24■□□□□ 0.19
Cops4O88544 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Cops4O88544 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cops4O88544 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cops4O88544 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cops4O88544 Haglr-201ENSMUST00000100000 2085 ntBASIC16.23■□□□□ 0.19
Cops4O88544 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.23■□□□□ 0.19
Cops4O88544 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cops4O88544 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cops4O88544 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.23■□□□□ 0.19
Cops4O88544 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.23■□□□□ 0.19
Cops4O88544 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cops4O88544 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Cops4O88544 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cops4O88544 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms