Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Gm8493-201ENSMUST00000196881 489 ntBASIC13.75□□□□□ -0.21
Tnfsf11O35235 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Tnfsf11O35235 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfsf11O35235 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfsf11O35235 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Dancr-204ENSMUST00000132389 2347 ntBASIC13.73□□□□□ -0.21
Tnfsf11O35235 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfsf11O35235 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Gm12821-201ENSMUST00000120022 600 ntBASIC13.72□□□□□ -0.21
Tnfsf11O35235 Gm43173-201ENSMUST00000202246 593 ntBASIC13.72□□□□□ -0.21
Tnfsf11O35235 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.72□□□□□ -0.21
Tnfsf11O35235 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfsf11O35235 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfsf11O35235 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfsf11O35235 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms