Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.24■□□□□ 0.51
Ebf3O08791 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ebf3O08791 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.23■□□□□ 0.51
Ebf3O08791 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ebf3O08791 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.23■□□□□ 0.51
Ebf3O08791 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.23■□□□□ 0.51
Ebf3O08791 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Ebf3O08791 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Ebf3O08791 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ebf3O08791 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Ebf3O08791 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.22■□□□□ 0.51
Ebf3O08791 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Mir2861-201ENSMUST00000175539 82 ntBASIC18.22■□□□□ 0.51
Ebf3O08791 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.22■□□□□ 0.51
Ebf3O08791 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ebf3O08791 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.22■□□□□ 0.51
Ebf3O08791 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ebf3O08791 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Ebf3O08791 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.21■□□□□ 0.51
Ebf3O08791 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ebf3O08791 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ebf3O08791 Gm12085-201ENSMUST00000119263 940 ntBASIC18.21■□□□□ 0.51
Ebf3O08791 Gm6659-201ENSMUST00000174752 547 ntBASIC18.21■□□□□ 0.51
Ebf3O08791 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.21■□□□□ 0.51
Ebf3O08791 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ebf3O08791 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ebf3O08791 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ebf3O08791 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ebf3O08791 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ebf3O08791 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ebf3O08791 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.2■□□□□ 0.5
Ebf3O08791 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ebf3O08791 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.2■□□□□ 0.5
Ebf3O08791 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Fst-202ENSMUST00000223640 2612 ntBASIC18.2■□□□□ 0.5
Ebf3O08791 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ebf3O08791 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ebf3O08791 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ebf3O08791 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ebf3O08791 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ebf3O08791 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ebf3O08791 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ebf3O08791 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.18■□□□□ 0.5
Ebf3O08791 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ebf3O08791 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ebf3O08791 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms